Atomistry » Actinium » PDB 8uz9-8uz9 » 8uz9
Atomistry »
  Actinium »
    PDB 8uz9-8uz9 »
      8uz9 »

Actinium in PDB 8uz9: Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host

Protein crystallography data

The structure of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host, PDB code: 8uz9 was solved by P.B.Rupert, R.K.Strong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.12 / 2.08
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 114.855, 114.855, 119.273, 90, 90, 90
R / Rfree (%) 22.5 / 25.5

Other elements in 8uz9:

The structure of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Actinium Binding Sites:

The binding sites of Actinium atom in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host (pdb code 8uz9). This binding sites where shown within 5.0 Angstroms radius around Actinium atom.
In total 3 binding sites of Actinium where determined in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host, PDB code: 8uz9:
Jump to Actinium binding site number: 1; 2; 3;

Actinium binding site 1 out of 3 in 8uz9

Go back to Actinium Binding Sites List in 8uz9
Actinium binding site 1 out of 3 in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host


Mono view


Stereo pair view

A full contact list of Actinium with other atoms in the Ac binding site number 1 of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ac200

b:178.0
occ:1.00
O10 A:4OL201 2.7 101.8 1.0
O9 A:4OL201 3.2 83.4 1.0
N3 A:4OL201 3.7 88.4 1.0
OH A:TYR106 3.8 58.2 1.0
C4 A:4OL201 3.8 78.4 1.0
NZ A:LYS134 3.8 73.3 1.0
NZ A:LYS125 4.0 70.6 1.0
CE2 A:TYR106 4.2 55.6 1.0
C14 A:4OL201 4.3 97.6 1.0
NH2 A:ARG81 4.4 85.7 1.0
CZ A:TYR106 4.5 56.3 1.0
CE A:LYS134 4.9 69.1 1.0

Actinium binding site 2 out of 3 in 8uz9

Go back to Actinium Binding Sites List in 8uz9
Actinium binding site 2 out of 3 in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host


Mono view


Stereo pair view

A full contact list of Actinium with other atoms in the Ac binding site number 2 of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ac200

b:206.7
occ:1.00
O10 B:4OL201 2.3 131.5 1.0
O9 B:4OL201 3.2 125.9 1.0
N3 B:4OL201 3.4 120.8 1.0
C4 B:4OL201 3.7 125.3 1.0
NZ B:LYS134 4.1 95.6 1.0
NZ B:LYS125 4.4 96.1 1.0
OH B:TYR106 4.5 88.5 1.0
C2 B:4OL201 4.7 114.7 1.0
CE B:LYS125 4.8 94.6 1.0
CE B:LYS134 5.0 100.0 1.0

Actinium binding site 3 out of 3 in 8uz9

Go back to Actinium Binding Sites List in 8uz9
Actinium binding site 3 out of 3 in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host


Mono view


Stereo pair view

A full contact list of Actinium with other atoms in the Ac binding site number 3 of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ac201

b:130.6
occ:1.00
O10 C:4OL202 2.5 85.5 1.0
O9 C:4OL202 2.7 72.6 1.0
O47 C:4OL202 2.8 71.0 1.0
O46 C:4OL202 2.9 77.8 1.0
N3 C:4OL202 3.2 67.5 1.0
C4 C:4OL202 3.3 64.4 1.0
O48 C:4OL202 3.3 81.9 1.0
NZ C:LYS125 3.4 69.5 1.0
O50 C:4OL202 3.4 123.0 1.0
C36 C:4OL202 3.5 72.5 1.0
N35 C:4OL202 3.6 68.6 1.0
NZ C:LYS134 3.8 62.3 1.0
N45 C:4OL202 4.2 133.9 1.0
O51 C:4OL202 4.3 122.9 1.0
C2 C:4OL202 4.5 67.2 1.0
N9 C:4OL202 4.5 85.3 1.0
C44 C:4OL202 4.6 135.1 1.0
CE C:LYS125 4.6 62.1 1.0
C5 C:4OL202 4.6 58.6 1.0
N27 C:4OL202 4.6 105.0 1.0
O49 C:4OL202 4.7 108.8 1.0
C37 C:4OL202 4.9 72.4 1.0
C34 C:4OL202 4.9 83.7 1.0
OH C:TYR106 5.0 55.3 1.0
N32 C:4OL202 5.0 97.8 1.0
CE C:LYS134 5.0 51.7 1.0

Reference:

J.N.Wacker, J.J.Woods, P.B.Rupert, A.Peterson, M.Allaire, W.W.Lukens, A.N.Gaiser, S.G.Minasian, R.K.Strong, R.J.Abergel. Actinium Chelation and Crystallization in A Macromolecular Scaffold. Nat Commun V. 15 5741 2024.
ISSN: ESSN 2041-1723
PubMed: 39009580
DOI: 10.1038/S41467-024-50017-5
Page generated: Sun Sep 29 12:43:29 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy