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Actinium in PDB 8uz9: Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host

Protein crystallography data

The structure of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host, PDB code: 8uz9 was solved by P.B.Rupert, R.K.Strong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.12 / 2.08
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 114.855, 114.855, 119.273, 90, 90, 90
R / Rfree (%) 22.5 / 25.5

Other elements in 8uz9:

The structure of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Actinium Binding Sites:

The binding sites of Actinium atom in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host (pdb code 8uz9). This binding sites where shown within 5.0 Angstroms radius around Actinium atom.
In total 3 binding sites of Actinium where determined in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host, PDB code: 8uz9:
Jump to Actinium binding site number: 1; 2; 3;

Actinium binding site 1 out of 3 in 8uz9

Go back to Actinium Binding Sites List in 8uz9
Actinium binding site 1 out of 3 in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host


Mono view


Stereo pair view

A full contact list of Actinium with other atoms in the Ac binding site number 1 of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ac200

b:178.0
occ:1.00
O10 A:4OL201 2.7 101.8 1.0
O9 A:4OL201 3.2 83.4 1.0
N3 A:4OL201 3.7 88.4 1.0
OH A:TYR106 3.8 58.2 1.0
C4 A:4OL201 3.8 78.4 1.0
NZ A:LYS134 3.8 73.3 1.0
NZ A:LYS125 4.0 70.6 1.0
CE2 A:TYR106 4.2 55.6 1.0
C14 A:4OL201 4.3 97.6 1.0
NH2 A:ARG81 4.4 85.7 1.0
CZ A:TYR106 4.5 56.3 1.0
CE A:LYS134 4.9 69.1 1.0

Actinium binding site 2 out of 3 in 8uz9

Go back to Actinium Binding Sites List in 8uz9
Actinium binding site 2 out of 3 in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host


Mono view


Stereo pair view

A full contact list of Actinium with other atoms in the Ac binding site number 2 of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ac200

b:206.7
occ:1.00
O10 B:4OL201 2.3 131.5 1.0
O9 B:4OL201 3.2 125.9 1.0
N3 B:4OL201 3.4 120.8 1.0
C4 B:4OL201 3.7 125.3 1.0
NZ B:LYS134 4.1 95.6 1.0
NZ B:LYS125 4.4 96.1 1.0
OH B:TYR106 4.5 88.5 1.0
C2 B:4OL201 4.7 114.7 1.0
CE B:LYS125 4.8 94.6 1.0
CE B:LYS134 5.0 100.0 1.0

Actinium binding site 3 out of 3 in 8uz9

Go back to Actinium Binding Sites List in 8uz9
Actinium binding site 3 out of 3 in the Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host


Mono view


Stereo pair view

A full contact list of Actinium with other atoms in the Ac binding site number 3 of Fundamental Characterization of Chelated and Crystallized Actinium in A Macromolecular Host within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ac201

b:130.6
occ:1.00
O10 C:4OL202 2.5 85.5 1.0
O9 C:4OL202 2.7 72.6 1.0
O47 C:4OL202 2.8 71.0 1.0
O46 C:4OL202 2.9 77.8 1.0
N3 C:4OL202 3.2 67.5 1.0
C4 C:4OL202 3.3 64.4 1.0
O48 C:4OL202 3.3 81.9 1.0
NZ C:LYS125 3.4 69.5 1.0
O50 C:4OL202 3.4 123.0 1.0
C36 C:4OL202 3.5 72.5 1.0
N35 C:4OL202 3.6 68.6 1.0
NZ C:LYS134 3.8 62.3 1.0
N45 C:4OL202 4.2 133.9 1.0
O51 C:4OL202 4.3 122.9 1.0
C2 C:4OL202 4.5 67.2 1.0
N9 C:4OL202 4.5 85.3 1.0
C44 C:4OL202 4.6 135.1 1.0
CE C:LYS125 4.6 62.1 1.0
C5 C:4OL202 4.6 58.6 1.0
N27 C:4OL202 4.6 105.0 1.0
O49 C:4OL202 4.7 108.8 1.0
C37 C:4OL202 4.9 72.4 1.0
C34 C:4OL202 4.9 83.7 1.0
OH C:TYR106 5.0 55.3 1.0
N32 C:4OL202 5.0 97.8 1.0
CE C:LYS134 5.0 51.7 1.0

Reference:

J.N.Wacker, J.J.Woods, P.B.Rupert, A.Peterson, M.Allaire, W.W.Lukens, A.N.Gaiser, S.G.Minasian, R.K.Strong, R.J.Abergel. Actinium Chelation and Crystallization in A Macromolecular Scaffold. Nat Commun V. 15 5741 2024.
ISSN: ESSN 2041-1723
PubMed: 39009580
DOI: 10.1038/S41467-024-50017-5
Page generated: Sun Jul 6 20:45:49 2025

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